Skip to main content

A Semester of Mistakes, Miracles, and Medulloblastoma


Nithya Shanmugam is a Sophomore who is majoring in Neuroscience. She was awarded a Fall 2018 Independent Grant which he used to conduct research on the role of microglial cell polarization in medulloblastoma therapy under Dr. Anna Kenney. 
Dear Future Researcher,
If you can take away one thing from this post, understand this: Your research may not always be successful in your eyes, but it will always be interesting and driven by curiosity. Whether you’re studying C. elegans, mesenchymal stem cells, or immune system brain cells (like me!), know that there is always something to be found – a cell to target, a receptor to inhibit, or a pathway to stimulate. 

I spent this summer and fall semester working at Dr. Kenney’s Lab, where I learned and re-learned several techniques, protocols, and cellular pathways while also conducting my project on the immune cells of Medulloblastoma. Medulloblastoma is a type of brain cancer of the cerebellum. With a prevalence rate of 18% among childhood brain tumors and a less than optimal standard of treatment, I’ve become invested in my research on both a technical and emotional level. 
When I first started at Dr. Kenney’s lab, I was apprehensive. It’s intimidating, being amongst scientific researchers whose jobs are to determine the role and function of molecules that are less than a fraction of a micrometer in size. However, after a few days working with my mentor, Dr. Victor Maximov, I soon understood that each researcher was just following his or her curiosity to conduct new experiments and answer new questions. Research is a curiosity-driven profession at its foundation. 
Alongside my mentor, I learned how to do each technique and perfect each protocol through practice. I won’t lie – I made some mistakes that I can look back at now and laugh at. It was as simple as not pipetting correctly, or as serious as mixing up which samples were in which wells of my western blot. But with repetition, these protocols have become ingrained in my brain – even if I wanted to forget at what voltage to run my western blot, I don’t think I could. 

After learning these techniques, I moved on to set up my own experiments for my project. In my previous years at the Kenney lab, I had studied how the gene expression of Ccl2 affected the concentration of tumor-associated macrophages in the tumor microenvironment. In my project for this semester, I looked at how the polarization of microglial cells (a type of macrophage that permanently resides in the brain) influenced tumor cell death and proliferation. As an independent grant recipient, I had proposed a schedule for all of my experiments, following a timeline from August to December. Little did I know that all of my experiments would be pushed back due to complications with my cell culture. 
All of my experiments banked on my ability to culture the microglial cells that I had extracted from mice pups. This culture should have only taken at most a few weeks, but it took close to a month and a half because I kept running into problems. Most of the time, it was that microglial cells were not detaching. Or, the culture was not pure. Through extensive troubleshooting, my mentor and I were finally able to perfect the cell culture procedure and isolate the cells for my experiments moving forward. 
               


You would think that would be the last of my problems, but more were to come. These problems weren’t fixable though – it came in the form of my results from PCR. They didn’t exactly fit what I had expected, and I was disappointed. For a while I thought there was nothing to find – I had convinced myself that my whole research project was hopeless. However, I ran a few more experiments to try and understand the results and look at them from a different angle. My most recent experiments have interesting, though-provoking results that I cannot wait to interpret and pursue! 
My research experience has been full of ups and downs and it is still ongoing. I can’t say what the future will hold in terms of my project, but I’ve found that as long as I follow my curiosity, I’ll be okay. The best advice I can offer to you is this: don’t get discouraged when your experiments don’t work, and always look beyond the results! 
Visit thUndergraduate Research Programs website to learn more about applying for Independent Research Grants.

Comments

Popular posts from this blog

Pop-Up Books used to ease Child Patients' Anxiety

  Holly Cordray   is a senior majoring in Neuroscience and Behavioral Biology. She was awarded a Fall 2020 Independent Grant which she used to conduct research at Children's Healthcare Atlanta. My name is Holly Cordray, and I am a senior in the Neuroscience and Behavioral Biology Honors Program.  Collaborating with Dr. Kara Prickett, a pediatric ENT surgeon at Children’s Healthcare of Atlanta, I am currently running a 150-patient clinical trial of an interactive resource I developed for pediatric patient education: an educational pop-up book for children facing surgery.  I began this project in 2019 with the support of the SURE program and my mentor in the Art History department, Dr. Tasha Dobbin-Bennett.  I wanted to build a resource that would engage children in active learning through hands-on features like flaps, wheels, and pull-tabs, equipping patients with understanding and positive coping strategies as they prepare for surgery.  I am hoping this ready-made resource will bec

Why Research Wednesday: Aamna's Story

Aamna Soniwala is a sophomore majoring in Human Health (on the pre-dental track) with a minor in Sociology. URP's Research Ambassador Arielle Segal had the pleasure of interviewing Aamna about her research experiences. Here it is:  What research do you do on campus? How long have you been doing it? “I work under Dr. K.M. Venkat Narayan with Dr. Jithin Varghese in the Hubert Department of Global Health at Rollins – specifically within the Emory Global Diabetes Research Center. I started during my second semester of my first year, researching global health equity in diabetes precision medicine.” How did you get started in your research? “I took HLTH 210 last spring, and Dr. Narayan was one of our asynchronous guest lecturers. I felt that I resonated with his values and research, so I reached out to him and started working with a post-doctoral fellow, Dr. Varghese.” How has research impacted your undergraduate career? “Research has allowed me to grow as a critical thinker and problem

A Whole New World of Research

Monica Vemulapalli is a junior majoring in Neuroscience and Behavioral Biology. She was awarded a Spring 2019 Conference Grant which she used to attend the Experimental Biology Conference . When I found out that my first ever research conference was going to be in my hometown of Orlando, Florida, I was excited! I knew that having an unfamiliar event happen at a very familiar place would make me less anxious. However, the conference turned out to be less stressful and more interesting than I ever thought. I attended  Experimental Biology (EB)  and   presented  my very first research poster , a memory that I will definitely cherish forever.